dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03637
Location and strand information: 25395 - 27944 (-)
Family: 1.C.75.1.2
Protein type: TC
Protein description: 16S rRNA endonuclease CdiA

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03638
Location and strand information: 28237 - 29166 (-)
Family: null
Protein type: null
Protein description: Protein FdhE

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03639
Location and strand information: 29163 - 29798 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase, cytochrome b556(fdo) subunit

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03640
Location and strand information: 29795 - 30697 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase-O iron-sulfur subunit

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03641
Location and strand information: 30710 - 33124 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase-O major subunit

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03642
Location and strand information: 33173 - 33760 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase-O major subunit

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03643
Location and strand information: 34199 - 35029 (+)
Family: null
Protein type: null
Protein description: Sulfur carrier protein FdhD

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03644
Location and strand information: 35144 - 35356 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03645
Location and strand information: 35398 - 35721 (-)
Family: 2.A.78.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03646
Location and strand information: 35721 - 36380 (-)
Family: 2.A.78.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03647
Location and strand information: 36483 - 37031 (+)
Family: HTH_3
Protein type: TF
Protein description: HTH-type transcriptional regulator SutR

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03648
Location and strand information: 37053 - 38048 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator RafR

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03649
Location and strand information: 38153 - 40276 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 6.3894
Protein molecular weight: 80231.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03650
Location and strand information: 40321 - 41595 (+)
Family: 2.A.1.5.4
Protein type: TC
Protein description: Melibiose permease

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03651
Location and strand information: 41583 - 41897 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03652
Location and strand information: 41894 - 43042 (-)
Family: null
Protein type: null
Protein description: Alcohol dehydrogenase 2

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03653
Location and strand information: 43114 - 44118 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03654
Location and strand information: 44115 - 45119 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03655
Location and strand information: 45119 - 46621 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000003187_15|CGC1
Gene ID: MGYG000003187_03656
Location and strand information: 46677 - 47663 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003187_03637	16S rRNA endonuclease CdiA	TC	25395	27944	-	1.C.75.1.2
MGYG000003187_03638	Protein FdhE	null	28237	29166	-	FdhE
MGYG000003187_03639	Formate dehydrogenase, cytochrome b556(fdo) subunit	TC	29163	29798	-	5.A.3.2.1
MGYG000003187_03640	Formate dehydrogenase-O iron-sulfur subunit	TC	29795	30697	-	5.A.3.2.1
MGYG000003187_03641	Formate dehydrogenase-O major subunit	TC	30710	33124	-	5.A.3.2.1
MGYG000003187_03642	Formate dehydrogenase-O major subunit	TC	33173	33760	-	5.A.3.2.1
MGYG000003187_03643	Sulfur carrier protein FdhD	null	34199	35029	+	FdhD-NarQ
MGYG000003187_03644	hypothetical protein	null	35144	35356	+	YdgH_BhsA-like
MGYG000003187_03645	hypothetical protein	TC	35398	35721	-	2.A.78.2.3
MGYG000003187_03646	hypothetical protein	TC	35721	36380	-	2.A.78.2.3
MGYG000003187_03647	HTH-type transcriptional regulator SutR	TF	36483	37031	+	HTH_3
MGYG000003187_03648	HTH-type transcriptional regulator RafR	TF	37053	38048	+	LacI
MGYG000003187_03649	Alpha-galactosidase	CAZyme	38153	40276	+	GH36
MGYG000003187_03650	Melibiose permease	TC	40321	41595	+	2.A.1.5.4
MGYG000003187_03651	L-rhamnose mutarotase	null	41583	41897	-	rhaM
MGYG000003187_03652	Alcohol dehydrogenase 2	null	41894	43042	-	Fe-ADH
MGYG000003187_03653	Autoinducer 2 import system permease protein LsrD	TC	43114	44118	-	3.A.1.2.8
MGYG000003187_03654	Ribose import permease protein RbsC	TC	44115	45119	-	3.A.1.2.9
MGYG000003187_03655	Ribose import ATP-binding protein RbsA	TC	45119	46621	-	3.A.1.2.9
MGYG000003187_03656	Autoinducer 2-binding protein LsrB	TC	46677	47663	-	3.A.1.2.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature